This page serves additional documentation of some of my Github and other source code projects. Most of the packages and code snippets were written in the R programming language for statistical computing.
| Repository (Source Code) | Type | Release | Author/(Maintainer) | Documentation |
|---|---|---|---|---|
| antibioticR | R package | alpha | tpetzoldt | Introduction |
| growthrates | R package | CRAN | tpetzoldt | 01 Introduction, 02 User-defined models |
| FAmle | R package | CRAN | F.Aucoin / (tpetzoldt) | CRAN |
| FAdist | R package | CRAN | F.Aucoin / (tpetzoldt) | CRAN |
| dynamic-R-models | code snippets | Github | tpetzoldt | Github |
| - chemostat-ODE | code snippets | - chemostat-ode | ||
| - chemostat-IBM | code snippets | - chemostat-ibm | ||
| - forcing functions and events | code snippets | - deSolve-forcing | ||
| - dynamic models in compiled code | code snippets | - deSolve-compiled | ||
| - dynamic models with shiny | code snippets | - deSolve-shiny | ||
| - stoichiometry-matrix ODE models with rodeo | code snippets | - deSolve-rodeo | ||
| Elements of Statistics with R | teaching | alpha | tpetzoldt | Slides, Tutorials |
| growthlab | teaching | alpha | tpetzoldt | Digitally controlled growth experiments |
Note: some of my other collaborative R projects are hosted on R-Forge.
| R package | Author | Release | Repository | More |
|---|---|---|---|---|
| simecol | Petzoldt | CRAN | R-Forge | Homepage |
| deSolve | Soetaert, Petzoldt and Setzer | CRAN | R-Forge | Homepage |
| FME | Soetaert and Petzoldt | CRAN | R-Forge | Docs |
| marelac | Soetaert et al. | CRAN | R-Forge | Docs |
| qualV | van den Boogaart, Rost and Petzoldt | CRAN | R-Forge | Docs |
| cardidates | Rolinski, Sachse and Petzoldt | CRAN | R-Forge | Docs |
| rLimnoLab | Petzoldt et al. | alpha | R-Forge | Homepage |